POP-OUT | CLOSE

An Information Portal to 105906 Biological Macromolecular Structures

RB69 DNA Polymerase L415K Ternary Complex
Sequence Clustering and Redundancy Reduction Results
4J2D
Sequence Clusters for the Sequence Entities in PDB 4J2D
Entity #1: Chains: A - DNA polymerase protein, length: 901 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 38524
95% 2 119 114
90% 2 119 123
70% 2 119 143
50% 2 119 180
40% 2 119 209
30% 2 119 227
Entity #2: Chains: T - DNA (5'-D(*TP*CP*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3') dna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: P - DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*T)-3') dna, length: 13 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.