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An Information Portal to 108395 Biological Macromolecular Structures

Structure of a novel telomere repeat binding protein bound to DNA
Sequence Clustering and Redundancy Reduction Results
4J19
Sequence Clusters for the Sequence Entities in PDB 4J19
Entity #1: Chains: A,B - Homeobox-containing protein 1 protein, length: 113 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 36697
95% 1 1 27661
90% 1 1 26586
70% 1 1 23896
50% 1 1 20604
40% 1 1 18241
30% 1 1 15493
Entity #2: Chains: C - DNA (5'-D(*CP*TP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: D - DNA (5'-D(*TP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*CP*A)-3') dna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.