Sequence Similarity Clusters for the Entities in PDB 4IZZ

Entity #1 | Chains: A,B
Transcription Factor HetR protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 6375
95 % 1 5 6577 Flexibility: Low
Max RMSD: 7.1, Avg RMSD: 2.9
PDBFlex
90 % 1 5 6551
70 % 1 7 4559
50 % 1 7 4351
40 % 1 7 4118
30 % 1 7 3730
Entity #2 | Chains: C,D
DNA (5'-D(*GP*TP*GP*AP*GP*GP*GP*GP*TP*TP*AP*AP*AP*CP*CP*CP*CP*TP*CP*AP*C)-3') dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures