Sequence Similarity Clusters for the Entities in PDB 4IZZ

Entity #1 | Chains: A,B
Transcription Factor HetR protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 6224
95 % 1 5 6432 Flexibility: Low
Max RMSD: 7.1, Avg RMSD: 2.9
PDBFlex
90 % 1 5 6409
70 % 1 7 4451
50 % 1 7 4276
40 % 1 7 4049
30 % 1 7 3671
Entity #2 | Chains: C,D
DNA (5'-D(*GP*TP*GP*AP*GP*GP*GP*GP*TP*TP*AP*AP*AP*CP*CP*CP*CP*TP*CP*AP*C)-3') dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures