Sequence Similarity Clusters for the Entities in PDB 4IZZ

Entity #1 | Chains: A,B
Transcription Factor HetR protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 4748
95 % 1 5 5474 Flexibility: Low
Max RMSD: 7.1, Avg RMSD: 2.9
PDBFlex
90 % 1 5 5488
70 % 1 7 3933
50 % 1 7 3820
40 % 1 7 3656
30 % 1 7 3405
Entity #2 | Chains: C,D
DNA (5'-D(*GP*TP*GP*AP*GP*GP*GP*GP*TP*TP*AP*AP*AP*CP*CP*CP*CP*TP*CP*AP*C)-3') dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.