Sequence Similarity Clusters for the Entities in PDB 4IZK

Entity #1 | Chains: A
Yellowtail Ascites Virus (YAV) VP4 protease protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41237
95 % 1 5 10521 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.3
PDBFlex
90 % 1 5 10381
70 % 1 7 3553
50 % 1 7 3462
40 % 1 7 3349
30 % 1 7 3127
Entity #2 | Chains: B
Yellowtail Ascites Virus (YAV) VP4 protease protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41237
95 % 2 5 10521 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.3
PDBFlex
90 % 2 5 10381
70 % 2 7 3553
50 % 2 7 3462
40 % 2 7 3349
30 % 2 7 3127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.