Sequence Similarity Clusters for the Entities in PDB 4IVY

Entity #1 | Chains: A,B
Estrogen receptor protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 67 220 37
95 % 81 260 30 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 1.5
PDBFlex
90 % 81 260 31
70 % 81 260 40
50 % 84 296 42
40 % 84 296 52
30 % 254 979 9
Entity #2 | Chains: C,D
Nuclear receptor coactivator 2 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.