Sequence Similarity Clusters for the Entities in PDB 4IUM

Entity #1 | Chains: A
papain-like protease 2 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58092
95 % 1 1 40050
90 % 1 1 38138
70 % 1 1 33770
50 % 1 1 28924
40 % 1 1 25589
30 % 1 1 21684
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 241 5
95 % 12 293 9
90 % 13 306 10
70 % 13 328 8
50 % 13 348 13
40 % 13 369 16
30 % 53 845 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.