Sequence Similarity Clusters for the Entities in PDB 4IUM

Entity #1 | Chains: A
papain-like protease 2 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57783
95 % 1 1 39850
90 % 1 1 37947
70 % 1 1 33609
50 % 1 1 28784
40 % 1 1 25471
30 % 1 1 21586
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 239 5
95 % 12 291 9
90 % 13 304 10
70 % 13 325 8
50 % 13 345 14
40 % 13 366 16
30 % 53 840 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.