Sequence Similarity Clusters for the Entities in PDB 4IUM

Entity #1 | Chains: A
papain-like protease 2 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62885
95 % 1 1 43303
90 % 1 1 41158
70 % 1 1 36280
50 % 1 1 30975
40 % 1 1 27357
30 % 1 1 23181
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 291 6
95 % 18 354 5
90 % 21 379 6
70 % 21 399 8
50 % 21 420 11
40 % 21 443 15
30 % 64 954 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.