Sequence Similarity Clusters for the Entities in PDB 4IUM

Entity #1 | Chains: A
papain-like protease 2 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64742
95 % 1 1 44650
90 % 1 1 42385
70 % 1 1 37285
50 % 1 1 31760
40 % 1 1 28037
30 % 1 1 23768
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 311 6
95 % 21 380 5
90 % 24 407 6
70 % 24 427 8
50 % 24 448 12
40 % 24 472 16
30 % 74 1019 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.