Sequence Similarity Clusters for the Entities in PDB 4ITQ

Entity #1 | Chains: A
Putative uncharacterized protein SCO1480 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59005
95 % 1 1 48157
90 % 1 1 45767
70 % 1 1 40209
50 % 1 1 34140
40 % 1 1 29912
30 % 1 1 25002
Entity #2 | Chains: B
5'-D(P*CP*CP*GP*CP*GP*CP*GP*C)-3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
5'-D(P*GP*CP*GP*CP*GP*CP*GP*G)-3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures