Sequence Similarity Clusters for the Entities in PDB 4ITQ

Entity #1 | Chains: A
Putative uncharacterized protein SCO1480 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63744
95 % 1 1 43897
90 % 1 1 41760
70 % 1 1 36843
50 % 1 1 31532
40 % 1 1 27849
30 % 1 1 23519
Entity #2 | Chains: B
5'-D(P*CP*CP*GP*CP*GP*CP*GP*C)-3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
5'-D(P*GP*CP*GP*CP*GP*CP*GP*G)-3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.