Sequence Similarity Clusters for the Entities in PDB 4IRE

Entity #1 | Chains: A,B,C,D,E
Proton-gated ion channel protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 15236
95 % 41 79 54 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.1
PDBFlex
90 % 41 79 60
70 % 43 83 52
50 % 48 109 19
40 % 51 126 22
30 % 51 126 40

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures