Sequence Similarity Clusters for the Entities in PDB 4IRE

Entity #1 | Chains: A,B,C,D,E
Proton-gated ion channel protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 15500
95 % 43 81 54 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.1
PDBFlex
90 % 43 81 59
70 % 45 85 53
50 % 50 111 19
40 % 53 128 23
30 % 53 128 41

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures