Sequence Similarity Clusters for the Entities in PDB 4IQX

Entity #1 | Chains: A
3D polymerase protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28535
95 % 10 27 2177 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 10 27 2233
70 % 10 27 2243
50 % 10 27 2249
40 % 12 31 1412
30 % 55 102 410
Entity #2 | Chains: B
RNA (5'-R(*AP*UP*GP*GP*GP*CP*C)-3') rna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
RNA (5'-R(*GP*GP*CP*CP*C)-3') rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures