POP-OUT | CLOSE

An Information Portal to 110619 Biological Macromolecular Structures

Mutant P44S P169S M296I of Foot-and-mouth disease Virus RNA-dependent RNA polymerase
Sequence Clustering and Redundancy Reduction Results
4IQX
Sequence Clusters for the Sequence Entities in PDB 4IQX
Entity #1: Chains: A - 3D polymerase protein, length: 481 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 41899
95% 8 22 1864
90% 8 22 1907
70% 8 22 1923
50% 8 22 1953
40% 10 26 1236
30% 40 80 314
Entity #2: Chains: B - RNA (5'-R(*AP*UP*GP*GP*GP*CP*C)-3') rna, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - RNA (5'-R(*GP*GP*CP*CP*C)-3') rna, length: 5 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.