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Yeast 20S proteasome in complex with the vinyl sulfone LU122
Sequence Clustering and Redundancy Reduction Results
4INT
Sequence Clusters for the Sequence Entities in PDB 4INT
Entity #1: Chains: A,O - Proteasome component Y7 protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 61 75 92
95% 61 75 134
90% 61 75 143
70% 61 75 168
50% 61 80 188
40% 247 336 11
30% 427 576 8
Entity #10: Chains: J,X - Proteasome component C11 protein, length: 198 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 60 74 99
95% 60 74 142
90% 60 74 154
70% 60 74 179
50% 60 74 217
40% 60 79 224
30% 60 79 240
Entity #11: Chains: K,Y - Proteasome component PRE2 protein, length: 212 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 53 62 120
95% 57 68 159
90% 57 68 171
70% 57 68 201
50% 57 73 205
40% 57 73 239
30% 131 176 30
Entity #12: Chains: L,Z - Proteasome component C5 protein, length: 222 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 61 75 93
95% 61 75 135
90% 61 75 144
70% 61 75 169
50% 61 75 211
40% 61 80 217
30% 61 80 236
Entity #13: Chains: M,a - Proteasome component PRE4 protein, length: 233 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 61 75 87
95% 61 75 129
90% 61 75 139
70% 61 75 164
50% 61 75 210
40% 61 80 215
30% 61 80 235
Entity #14: Chains: N,b - Proteasome component PRE3 protein, length: 196 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 61 75 94
95% 61 75 137
90% 61 75 146
70% 61 75 171
50% 61 80 189
40% 61 80 218
30% 132 176 30
Entity #2: Chains: B,P - Proteasome component Y13 protein, length: 258 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 61 75 89
95% 61 75 131
90% 61 75 140
70% 61 75 165
50% 61 80 185
40% 248 336 11
30% 428 576 8
Entity #3: Chains: C,Q - Proteasome component PRE6 protein, length: 254 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 61 75 90
95% 61 75 132
90% 61 75 141
70% 61 75 166
50% 61 80 186
40% 249 336 11
30% 429 576 8
Entity #4: Chains: D,R - Proteasome component PUP2 protein, length: 260 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 60 75 88
95% 60 75 130
90% 61 76 137
70% 61 76 161
50% 61 81 181
40% 250 336 11
30% 430 576 8
Entity #5: Chains: E,S - Proteasome component PRE5 protein, length: 234 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 59 73 102
95% 61 75 136
90% 61 75 145
70% 61 75 170
50% 61 75 212
40% 61 75 242
30% 431 576 8
Entity #6: Chains: F,T - Proteasome component C1 protein, length: 288 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 29 38 293
95% 29 38 417
90% 29 38 441
70% 29 38 463
50% 29 38 513
40% 29 38 541
30% 432 576 8
Entity #7: Chains: G,U - Proteasome component C7-alpha protein, length: 252 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 61 75 91
95% 61 75 133
90% 61 75 142
70% 61 75 167
50% 61 80 187
40% 61 80 216
30% 433 576 8
Entity #8: Chains: H,V - Proteasome component PUP1 protein, length: 232 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 57 68 109
95% 57 68 158
90% 57 68 170
70% 57 68 200
50% 57 73 204
40% 57 73 238
30% 57 73 255
Entity #9: Chains: I,W - Proteasome component PUP3 protein, length: 205 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 61 75 95
95% 61 75 138
90% 61 75 147
70% 61 75 172
50% 61 80 190
40% 61 80 219
30% 61 80 237
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.