Sequence Similarity Clusters for the Entities in PDB 4INR

Entity #1 | Chains: A,O
Proteasome component Y7 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 176 33
95 % 136 176 47
90 % 136 176 51
70 % 136 176 61
50 % 137 184 76
40 % 548 753 4
30 % 956 1306 3
Entity #10 | Chains: J,X
Proteasome component C11 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 175 37
95 % 136 175 53
90 % 136 175 57
70 % 136 175 66
50 % 136 175 93
40 % 137 183 103
30 % 137 183 116
Entity #11 | Chains: K,Y
Proteasome component PRE2 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 84 113 82
95 % 133 167 56
90 % 133 167 60
70 % 133 167 71
50 % 134 175 86
40 % 134 175 111
30 % 280 383 17
Entity #12 | Chains: L,Z
Proteasome component C5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 176 34
95 % 136 176 48
90 % 136 176 52
70 % 136 176 62
50 % 136 176 92
40 % 137 184 98
30 % 137 184 112
Entity #13 | Chains: M,a
Proteasome component PRE4 protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 176 28
95 % 136 176 42
90 % 136 176 47
70 % 136 176 57
50 % 136 176 91
40 % 137 184 95
30 % 137 184 111
Entity #14 | Chains: N,b
Proteasome component PRE3 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 176 35
95 % 136 176 50
90 % 136 176 54
70 % 136 176 64
50 % 137 184 77
40 % 137 184 99
30 % 281 383 17
Entity #2 | Chains: B,P
Proteasome component Y13 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 176 30
95 % 136 176 44
90 % 136 176 48
70 % 136 176 58
50 % 137 184 73
40 % 549 753 4
30 % 957 1306 3
Entity #3 | Chains: C,Q
Proteasome component PRE6 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 176 31
95 % 136 176 45
90 % 136 176 49
70 % 136 176 59
50 % 137 184 74
40 % 550 753 4
30 % 958 1306 3
Entity #4 | Chains: D,R
Proteasome component PUP2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 135 176 29
95 % 135 176 43
90 % 136 177 46
70 % 136 177 56
50 % 137 185 71
40 % 551 753 4
30 % 959 1306 3
Entity #5 | Chains: E,S
Proteasome component PRE5 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 174 38
95 % 136 176 49
90 % 136 176 53
70 % 136 176 63
50 % 137 184 72
40 % 137 184 96
30 % 960 1306 3
Entity #6 | Chains: F,T
Proteasome component C1 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 140 49
95 % 118 140 70
90 % 118 140 73
70 % 118 140 87
50 % 118 140 127
40 % 118 140 143
30 % 961 1306 3
Entity #7 | Chains: G,U
Proteasome component C7-alpha protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 176 32
95 % 136 176 46
90 % 136 176 50
70 % 136 176 60
50 % 137 184 75
40 % 137 184 97
30 % 962 1306 3
Entity #8 | Chains: H,V
Proteasome component PUP1 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 120 152 41
95 % 133 167 55
90 % 133 167 59
70 % 133 167 70
50 % 134 175 85
40 % 134 175 110
30 % 134 175 126
Entity #9 | Chains: I,W
Proteasome component PUP3 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 176 36
95 % 136 176 51
90 % 136 176 55
70 % 136 176 65
50 % 137 184 78
40 % 137 184 100
30 % 137 184 113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.