Sequence Similarity Clusters for the Entities in PDB 4INR

Entity #1 | Chains: A,O
Proteasome component Y7 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 204 17
95 % 161 204 27
90 % 161 204 30
70 % 161 204 38
50 % 162 213 63
40 % 648 869 4
30 % 1131 1509 3
Entity #10 | Chains: J,X
Proteasome component C11 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 203 21
95 % 161 203 32
90 % 161 203 35
70 % 161 203 43
50 % 161 203 80
40 % 162 212 88
30 % 162 212 107
Entity #11 | Chains: K,Y
Proteasome component PRE2 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 98 127 77
95 % 157 192 42
90 % 157 192 47
70 % 157 192 56
50 % 158 201 76
40 % 158 201 96
30 % 329 437 16
Entity #12 | Chains: L,Z
Proteasome component C5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 204 18
95 % 161 204 28
90 % 161 204 31
70 % 161 204 39
50 % 161 204 78
40 % 162 212 86
30 % 162 213 102
Entity #13 | Chains: M,a
Proteasome component PRE4 protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 204 12
95 % 161 204 21
90 % 161 204 25
70 % 161 204 33
50 % 161 204 77
40 % 162 212 84
30 % 162 212 106
Entity #14 | Chains: N,b
Proteasome component PRE3 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 204 19
95 % 161 204 30
90 % 161 204 33
70 % 161 204 41
50 % 162 212 68
40 % 162 212 87
30 % 330 437 16
Entity #2 | Chains: B,P
Proteasome component Y13 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 204 14
95 % 161 204 24
90 % 161 204 27
70 % 161 204 35
50 % 162 213 61
40 % 649 869 4
30 % 1132 1509 3
Entity #3 | Chains: C,Q
Proteasome component PRE6 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 204 15
95 % 161 204 25
90 % 161 204 28
70 % 161 204 36
50 % 162 212 66
40 % 650 869 4
30 % 1133 1509 3
Entity #4 | Chains: D,R
Proteasome component PUP2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 160 204 13
95 % 160 204 22
90 % 161 205 24
70 % 161 205 32
50 % 162 214 60
40 % 651 869 4
30 % 1134 1509 3
Entity #5 | Chains: E,S
Proteasome component PRE5 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 159 202 23
95 % 161 204 29
90 % 161 204 32
70 % 161 204 40
50 % 162 212 65
40 % 162 212 85
30 % 1135 1509 3
Entity #6 | Chains: F,T
Proteasome component C1 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 143 168 43
95 % 143 168 62
90 % 143 168 67
70 % 143 168 77
50 % 143 168 107
40 % 143 168 129
30 % 1136 1509 3
Entity #7 | Chains: G,U
Proteasome component C7-alpha protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 204 16
95 % 161 204 26
90 % 161 204 29
70 % 161 204 37
50 % 162 212 67
40 % 162 213 82
30 % 1137 1509 3
Entity #8 | Chains: H,V
Proteasome component PUP1 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 142 175 41
95 % 161 204 23
90 % 161 204 26
70 % 161 204 34
50 % 162 213 62
40 % 162 213 81
30 % 162 213 101
Entity #9 | Chains: I,W
Proteasome component PUP3 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 204 20
95 % 161 204 31
90 % 161 204 34
70 % 161 204 42
50 % 162 212 69
40 % 162 213 83
30 % 162 213 103

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.