Sequence Similarity Clusters for the Entities in PDB 4INR

Entity #1 | Chains: A,O
Proteasome component Y7 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 250 14
95 % 201 250 23
90 % 201 250 24
70 % 201 250 34
50 % 212 278 42
40 % 848 1129 3
30 % 1481 1964 3
Entity #10 | Chains: J,X
Proteasome component C11 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 249 17
95 % 201 249 28
90 % 201 249 29
70 % 201 249 39
50 % 201 249 69
40 % 212 277 54
30 % 212 277 70
Entity #11 | Chains: K,Y
Proteasome component PRE2 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 103 132 82
95 % 162 197 57
90 % 162 197 62
70 % 208 250 27
50 % 208 251 57
40 % 208 251 68
30 % 434 550 13
Entity #12 | Chains: L,Z
Proteasome component C5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 168 217 24
95 % 201 250 24
90 % 201 250 25
70 % 201 250 35
50 % 201 250 66
40 % 212 277 53
30 % 212 278 68
Entity #13 | Chains: M,a
Proteasome component PRE4 protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 250 9
95 % 201 250 17
90 % 201 250 19
70 % 201 250 29
50 % 201 250 65
40 % 212 268 59
30 % 212 268 75
Entity #14 | Chains: N,b
Proteasome component PRE3 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 250 15
95 % 201 250 26
90 % 201 250 27
70 % 201 250 37
50 % 212 268 50
40 % 212 268 60
30 % 435 550 13
Entity #2 | Chains: B,P
Proteasome component Y13 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 250 11
95 % 201 250 20
90 % 201 250 21
70 % 201 250 31
50 % 212 278 41
40 % 849 1129 3
30 % 1482 1964 3
Entity #3 | Chains: C,Q
Proteasome component PRE6 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 250 12
95 % 201 250 21
90 % 201 250 22
70 % 201 250 32
50 % 212 277 44
40 % 850 1129 3
30 % 1483 1964 3
Entity #4 | Chains: D,R
Proteasome component PUP2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 250 10
95 % 200 250 18
90 % 201 251 18
70 % 201 251 28
50 % 212 279 39
40 % 851 1129 3
30 % 1484 1964 3
Entity #5 | Chains: E,S
Proteasome component PRE5 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 199 248 18
95 % 201 250 25
90 % 201 250 26
70 % 201 250 36
50 % 212 277 43
40 % 212 277 52
30 % 1485 1964 3
Entity #6 | Chains: F,T
Proteasome component C1 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 183 214 25
95 % 183 214 35
90 % 183 214 40
70 % 183 214 50
50 % 183 214 86
40 % 183 214 105
30 % 1486 1964 3
Entity #7 | Chains: G,U
Proteasome component C7-alpha protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 250 13
95 % 201 250 22
90 % 201 250 23
70 % 201 250 33
50 % 212 277 45
40 % 212 278 50
30 % 1487 1964 3
Entity #8 | Chains: H,V
Proteasome component PUP1 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 182 215 23
95 % 201 250 19
90 % 201 250 20
70 % 201 250 30
50 % 212 278 40
40 % 212 278 49
30 % 212 278 67
Entity #9 | Chains: I,W
Proteasome component PUP3 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 250 16
95 % 201 250 27
90 % 201 250 28
70 % 201 250 38
50 % 212 277 46
40 % 212 278 51
30 % 212 278 69

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.