Sequence Similarity Clusters for the Entities in PDB 4INR

Entity #1 | Chains: A,O
Proteasome component Y7 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 243 13
95 % 200 243 21
90 % 200 243 22
70 % 200 243 32
50 % 211 270 40
40 % 844 1097 3
30 % 1474 1908 3
Entity #10 | Chains: J,X
Proteasome component C11 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 242 16
95 % 200 242 26
90 % 200 242 27
70 % 200 242 37
50 % 200 242 66
40 % 211 269 53
30 % 211 269 68
Entity #11 | Chains: K,Y
Proteasome component PRE2 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 103 132 78
95 % 162 197 53
90 % 162 197 57
70 % 207 249 25
50 % 207 250 51
40 % 207 250 58
30 % 427 536 13
Entity #12 | Chains: L,Z
Proteasome component C5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 168 211 23
95 % 200 243 22
90 % 200 243 23
70 % 200 243 33
50 % 200 243 65
40 % 211 269 52
30 % 211 270 66
Entity #13 | Chains: M,a
Proteasome component PRE4 protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 243 8
95 % 200 243 15
90 % 200 243 17
70 % 200 243 27
50 % 200 243 64
40 % 211 261 55
30 % 211 261 71
Entity #14 | Chains: N,b
Proteasome component PRE3 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 243 14
95 % 200 243 24
90 % 200 243 25
70 % 200 243 35
50 % 211 261 47
40 % 211 261 56
30 % 428 536 13
Entity #2 | Chains: B,P
Proteasome component Y13 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 243 10
95 % 200 243 18
90 % 200 243 19
70 % 200 243 29
50 % 211 270 39
40 % 845 1097 3
30 % 1475 1908 3
Entity #3 | Chains: C,Q
Proteasome component PRE6 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 243 11
95 % 200 243 19
90 % 200 243 20
70 % 200 243 30
50 % 211 269 42
40 % 846 1097 3
30 % 1476 1908 3
Entity #4 | Chains: D,R
Proteasome component PUP2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 199 243 9
95 % 199 243 16
90 % 200 244 16
70 % 200 244 26
50 % 211 271 37
40 % 847 1097 3
30 % 1477 1908 3
Entity #5 | Chains: E,S
Proteasome component PRE5 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 198 241 17
95 % 200 243 23
90 % 200 243 24
70 % 200 243 34
50 % 211 269 41
40 % 211 269 51
30 % 1478 1908 3
Entity #6 | Chains: F,T
Proteasome component C1 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 182 207 25
95 % 182 207 38
90 % 182 207 43
70 % 182 207 52
50 % 182 207 85
40 % 182 207 104
30 % 1479 1908 3
Entity #7 | Chains: G,U
Proteasome component C7-alpha protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 243 12
95 % 200 243 20
90 % 200 243 21
70 % 200 243 31
50 % 211 269 43
40 % 211 270 48
30 % 1480 1908 3
Entity #8 | Chains: H,V
Proteasome component PUP1 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 181 214 22
95 % 200 243 17
90 % 200 243 18
70 % 200 243 28
50 % 211 270 38
40 % 211 270 47
30 % 211 270 65
Entity #9 | Chains: I,W
Proteasome component PUP3 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 243 15
95 % 200 243 25
90 % 200 243 26
70 % 200 243 36
50 % 211 269 44
40 % 211 270 49
30 % 211 270 67

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.