Sequence Similarity Clusters for the Entities in PDB 4INR

Entity #1 | Chains: A,O
Proteasome component Y7 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 244 13
95 % 201 244 21
90 % 201 244 22
70 % 201 244 32
50 % 212 271 41
40 % 848 1101 3
30 % 1481 1915 3
Entity #10 | Chains: J,X
Proteasome component C11 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 243 16
95 % 201 243 26
90 % 201 243 27
70 % 201 243 37
50 % 201 243 68
40 % 212 270 54
30 % 212 270 71
Entity #11 | Chains: K,Y
Proteasome component PRE2 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 103 132 78
95 % 162 197 54
90 % 162 197 58
70 % 208 250 25
50 % 208 251 52
40 % 208 251 63
30 % 434 544 12
Entity #12 | Chains: L,Z
Proteasome component C5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 168 211 23
95 % 201 244 22
90 % 201 244 23
70 % 201 244 33
50 % 201 244 67
40 % 212 270 53
30 % 212 271 68
Entity #13 | Chains: M,a
Proteasome component PRE4 protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 244 8
95 % 201 244 15
90 % 201 244 17
70 % 201 244 27
50 % 201 244 66
40 % 212 262 56
30 % 212 262 74
Entity #14 | Chains: N,b
Proteasome component PRE3 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 244 14
95 % 201 244 24
90 % 201 244 25
70 % 201 244 35
50 % 212 262 49
40 % 212 262 57
30 % 435 544 12
Entity #2 | Chains: B,P
Proteasome component Y13 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 244 10
95 % 201 244 18
90 % 201 244 19
70 % 201 244 29
50 % 212 271 40
40 % 849 1101 3
30 % 1482 1915 3
Entity #3 | Chains: C,Q
Proteasome component PRE6 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 244 11
95 % 201 244 19
90 % 201 244 20
70 % 201 244 30
50 % 212 270 43
40 % 850 1101 3
30 % 1483 1915 3
Entity #4 | Chains: D,R
Proteasome component PUP2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 200 244 9
95 % 200 244 16
90 % 201 245 16
70 % 201 245 26
50 % 212 272 38
40 % 851 1101 3
30 % 1484 1915 3
Entity #5 | Chains: E,S
Proteasome component PRE5 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 199 242 17
95 % 201 244 23
90 % 201 244 24
70 % 201 244 34
50 % 212 270 42
40 % 212 270 52
30 % 1485 1915 3
Entity #6 | Chains: F,T
Proteasome component C1 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 183 208 25
95 % 183 208 37
90 % 183 208 41
70 % 183 208 51
50 % 183 208 85
40 % 183 208 104
30 % 1486 1915 3
Entity #7 | Chains: G,U
Proteasome component C7-alpha protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 244 12
95 % 201 244 20
90 % 201 244 21
70 % 201 244 31
50 % 212 270 44
40 % 212 271 49
30 % 1487 1915 3
Entity #8 | Chains: H,V
Proteasome component PUP1 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 182 215 22
95 % 201 244 17
90 % 201 244 18
70 % 201 244 28
50 % 212 271 39
40 % 212 271 48
30 % 212 271 67
Entity #9 | Chains: I,W
Proteasome component PUP3 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 201 244 15
95 % 201 244 25
90 % 201 244 26
70 % 201 244 36
50 % 212 270 45
40 % 212 271 50
30 % 212 271 69

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.