Sequence Similarity Clusters for the Entities in PDB 4INR

Entity #1 | Chains: A,O
Proteasome component Y7 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 199 18
95 % 158 199 28
90 % 158 199 32
70 % 158 199 41
50 % 159 208 68
40 % 636 849 4
30 % 1110 1474 3
Entity #10 | Chains: J,X
Proteasome component C11 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 198 22
95 % 158 198 34
90 % 158 198 38
70 % 158 198 49
50 % 158 198 84
40 % 159 207 91
30 % 159 207 109
Entity #11 | Chains: K,Y
Proteasome component PRE2 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 96 125 81
95 % 155 190 49
90 % 155 190 55
70 % 155 190 64
50 % 156 199 76
40 % 156 199 95
30 % 324 430 16
Entity #12 | Chains: L,Z
Proteasome component C5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 199 19
95 % 158 199 29
90 % 158 199 33
70 % 158 199 42
50 % 158 199 81
40 % 159 207 89
30 % 159 208 106
Entity #13 | Chains: M,a
Proteasome component PRE4 protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 199 13
95 % 158 199 22
90 % 158 199 27
70 % 158 199 36
50 % 158 199 80
40 % 159 207 87
30 % 159 207 108
Entity #14 | Chains: N,b
Proteasome component PRE3 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 199 20
95 % 158 199 31
90 % 158 199 35
70 % 158 199 45
50 % 159 207 72
40 % 159 207 90
30 % 325 430 16
Entity #2 | Chains: B,P
Proteasome component Y13 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 199 15
95 % 158 199 25
90 % 158 199 29
70 % 158 199 38
50 % 159 208 66
40 % 637 849 4
30 % 1111 1474 3
Entity #3 | Chains: C,Q
Proteasome component PRE6 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 199 16
95 % 158 199 26
90 % 158 199 30
70 % 158 199 39
50 % 159 207 70
40 % 638 849 4
30 % 1112 1474 3
Entity #4 | Chains: D,R
Proteasome component PUP2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 157 199 14
95 % 157 199 23
90 % 158 200 26
70 % 158 200 34
50 % 159 209 65
40 % 639 849 4
30 % 1113 1474 3
Entity #5 | Chains: E,S
Proteasome component PRE5 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 156 197 23
95 % 158 199 30
90 % 158 199 34
70 % 158 199 44
50 % 159 207 69
40 % 159 207 88
30 % 1114 1474 3
Entity #6 | Chains: F,T
Proteasome component C1 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 140 163 45
95 % 140 163 65
90 % 140 163 69
70 % 140 163 80
50 % 140 163 110
40 % 140 163 130
30 % 1115 1474 3
Entity #7 | Chains: G,U
Proteasome component C7-alpha protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 199 17
95 % 158 199 27
90 % 158 199 31
70 % 158 199 40
50 % 159 207 71
40 % 159 208 84
30 % 1116 1474 3
Entity #8 | Chains: H,V
Proteasome component PUP1 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 142 175 41
95 % 158 199 24
90 % 158 199 28
70 % 158 199 37
50 % 159 208 67
40 % 159 208 83
30 % 159 208 105
Entity #9 | Chains: I,W
Proteasome component PUP3 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 199 21
95 % 158 199 32
90 % 158 199 36
70 % 158 199 46
50 % 159 207 73
40 % 159 208 85
30 % 159 208 107

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.