Sequence Similarity Clusters for the Entities in PDB 4INB

Entity #1 | Chains: A
Gag protein protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 35 193
95 % 16 45 211 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.4
PDBFlex
90 % 17 46 219
70 % 17 46 248
50 % 19 50 256
40 % 19 50 272
30 % 21 53 273

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.