Sequence Similarity Clusters for the Entities in PDB 4ILH

Entity #1 | Chains: A
Pre-mRNA-splicing factor 8 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 20153
95 % 2 7 6910 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.8
PDBFlex
90 % 2 7 6890
70 % 2 7 6724
50 % 2 8 5780
40 % 2 8 5411
30 % 2 8 4857
Entity #2 | Chains: B
A1 cistron-splicing factor AAR2 protein, length: 339 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54774
95 % 2 7 7579 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.1
PDBFlex
90 % 2 7 7527
70 % 2 7 7333
50 % 2 7 6752
40 % 2 7 6283
30 % 2 7 5621

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.