Sequence Similarity Clusters for the Entities in PDB 4ILH

Entity #1 | Chains: A
Pre-mRNA-splicing factor 8 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 18706
95 % 2 7 7555 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.8
PDBFlex
90 % 2 7 7502
70 % 2 7 7292
50 % 2 8 6104
40 % 2 8 5674
30 % 2 8 4991
Entity #2 | Chains: B
A1 cistron-splicing factor AAR2 protein, length: 339 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59038
95 % 2 7 8407 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.1
PDBFlex
90 % 2 7 8331
70 % 2 7 7903
50 % 2 7 7266
40 % 2 7 6704
30 % 2 7 5869

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures