Sequence Similarity Clusters for the Entities in PDB 4IKJ

Entity #1 | Chains: A,B
Transthyretin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 203 224 24
95 % 269 297 10 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 269 297 12
70 % 271 303 16
50 % 281 314 21
40 % 281 314 34
30 % 289 326 48

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures