Sequence Similarity Clusters for the Entities in PDB 4IJM

Entity #1 | Chains: A,B,C,D,E,F
Circadian clock protein kinase KaiC protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 11272
95 % 14 22 513 Flexibility: Low
Max RMSD: 5.9, Avg RMSD: 1.1
PDBFlex
90 % 14 22 546
70 % 15 24 536
50 % 15 24 589
40 % 15 24 630
30 % 15 24 619

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.