Sequence Similarity Clusters for the Entities in PDB 4IJD

Entity #1 | Chains: A,B
Histone-lysine N-methyltransferase PRDM9 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36333
95 % 1 1 27173 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 29712
70 % 1 1 26626
50 % 1 1 22817
40 % 1 1 20092
30 % 1 1 16802

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures