Sequence Similarity Clusters for the Entities in PDB 4IJD

Entity #1 | Chains: A,B
Histone-lysine N-methyltransferase PRDM9 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35531
95 % 1 1 26575 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 29111
70 % 1 1 26157
50 % 1 1 22428
40 % 1 1 19759
30 % 1 1 16515

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures