Sequence Similarity Clusters for the Entities in PDB 4IIJ

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 53 74 170
95 % 54 143 106
90 % 54 143 113
70 % 54 150 110
50 % 54 150 148
40 % 107 298 49
30 % 109 308 56
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 44 346
95 % 54 138 114
90 % 54 143 109
70 % 54 148 109
50 % 54 148 147
40 % 108 298 49
30 % 110 308 56
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 42 56 662
95 % 48 69 681
90 % 48 69 708
70 % 48 69 759
50 % 48 69 808
40 % 48 69 843
30 % 48 69 831
Entity #4 | Chains: F
Tubulin tyrosine ligase, TTL protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 48 763
95 % 44 48 1054
90 % 44 48 1075
70 % 44 51 1037
50 % 44 51 1077
40 % 44 51 1090
30 % 44 51 1067

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.