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An Information Portal to 110790 Biological Macromolecular Structures

Crystal structure of tubulin-stathmin-TTL-apo complex
Sequence Clustering and Redundancy Reduction Results
4IIJ
Sequence Clusters for the Sequence Entities in PDB 4IIJ
Entity #1: Chains: A,C - Tubulin alpha-1B chain protein, length: 451 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 23 30 420
95% 23 83 145
90% 23 83 155
70% 23 85 175
50% 23 85 209
40% 45 169 115
30% 47 175 124
Entity #2: Chains: B,D - Tubulin beta-2B chain protein, length: 445 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 17 890
95% 23 82 146
90% 23 82 156
70% 23 84 174
50% 23 84 208
40% 46 169 115
30% 48 175 124
Entity #3: Chains: E - Stathmin-4 protein, length: 143 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 15 26 1306
95% 20 38 1128
90% 20 38 1144
70% 20 38 1170
50% 20 38 1233
40% 20 38 1261
30% 20 38 1236
Entity #4: Chains: F - Tubulin tyrosine ligase, TTL protein, length: 384 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 17 2299
95% 16 17 2910
90% 16 17 2953
70% 16 20 2294
50% 16 20 2311
40% 16 20 2303
30% 16 20 2161
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.