Sequence Similarity Clusters for the Entities in PDB 4IIJ

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 43 63 176
95 % 44 128 110
90 % 44 128 114
70 % 44 130 133
50 % 44 130 163
40 % 87 258 59
30 % 89 266 73
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 32 504
95 % 44 123 117
90 % 44 126 115
70 % 44 128 132
50 % 44 128 162
40 % 88 258 59
30 % 90 266 73
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 46 754
95 % 38 59 773
90 % 38 59 803
70 % 38 59 844
50 % 38 59 881
40 % 38 59 907
30 % 38 59 896
Entity #4 | Chains: F
Tubulin tyrosine ligase, TTL protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 38 929
95 % 34 38 1277
90 % 34 38 1301
70 % 34 41 1202
50 % 34 41 1248
40 % 34 41 1258
30 % 34 41 1233

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.