Sequence Similarity Clusters for the Entities in PDB 4II5

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 245 367 23
95 % 254 383 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 254 383 38
70 % 254 383 44
50 % 263 408 73
40 % 267 465 50
30 % 1885 4076 2
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9175
95 % 4 4 9408 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 29 109 161
70 % 29 109 178
50 % 29 109 219
40 % 29 109 237
30 % 30 115 243

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures