Sequence Similarity Clusters for the Entities in PDB 4II3

Entity #1 | Chains: A,C
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 14110
95 % 4 4 10753
90 % 4 4 10620
70 % 4 4 10105
50 % 9 9 3681
40 % 9 9 3543
30 % 9 9 3315
Entity #2 | Chains: B,D
Ubiquitin-60S ribosomal protein L40 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46681
95 % 3 4 13086
90 % 285 404 6
70 % 300 424 8
50 % 310 445 12
40 % 323 469 17
30 % 600 1016 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.