Sequence Similarity Clusters for the Entities in PDB 4II3

Entity #1 | Chains: A,C
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21925
95 % 2 2 18777
90 % 2 2 18269
70 % 2 2 16880
50 % 4 4 7584
40 % 4 4 6983
30 % 4 4 6206
Entity #2 | Chains: B,D
Ubiquitin-60S ribosomal protein L40 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42060
95 % 3 4 11777
90 % 6 7 6998
70 % 220 331 8
50 % 230 351 13
40 % 242 373 16
30 % 466 851 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.