Sequence Similarity Clusters for the Entities in PDB 4II3

Entity #1 | Chains: A,C
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21011
95 % 2 2 18052
90 % 2 2 17558
70 % 2 2 16216
50 % 4 4 7267
40 % 4 4 6696
30 % 4 4 5951
Entity #2 | Chains: B,D
Ubiquitin-60S ribosomal protein L40 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40423
95 % 3 4 11235
90 % 6 7 6719
70 % 199 300 16
50 % 209 320 15
40 % 221 341 18
30 % 439 807 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.