Sequence Similarity Clusters for the Entities in PDB 4II2

Entity #1 | Chains: A
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 21455
95 % 1 2 18405
90 % 1 2 17911
70 % 1 2 16537
50 % 2 4 7417
40 % 2 4 6838
30 % 2 4 6077
Entity #2 | Chains: B
Ubiquitin-60S ribosomal protein L40 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62407
95 % 1 2 31175
90 % 104 294 10
70 % 112 315 9
50 % 118 335 14
40 % 128 356 16
30 % 298 829 10
Entity #3 | Chains: C
Ubiquitin-conjugating enzyme E2 4 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55747
95 % 1 1 38647
90 % 1 1 36826
70 % 26 49 497
50 % 41 78 269
40 % 79 159 159
30 % 80 167 169

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.