Sequence Similarity Clusters for the Entities in PDB 4II2

Entity #1 | Chains: A
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22296
95 % 1 2 19065
90 % 1 2 18547
70 % 1 2 17131
50 % 2 4 7710
40 % 2 4 7096
30 % 2 4 6294
Entity #2 | Chains: B
Ubiquitin-60S ribosomal protein L40 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64650
95 % 1 2 32276
90 % 111 316 6
70 % 120 338 8
50 % 126 359 12
40 % 136 381 17
30 % 314 866 9
Entity #3 | Chains: C
Ubiquitin-conjugating enzyme E2 4 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57816
95 % 1 1 40035
90 % 1 1 38121
70 % 27 51 502
50 % 42 81 280
40 % 80 163 163
30 % 81 171 175

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.