Sequence Similarity Clusters for the Entities in PDB 4II2

Entity #1 | Chains: A
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22715
95 % 1 2 19395
90 % 1 2 18873
70 % 1 2 17422
50 % 2 4 7841
40 % 2 4 7217
30 % 2 4 6392
Entity #2 | Chains: B
Ubiquitin-60S ribosomal protein L40 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65702
95 % 1 2 32808
90 % 133 346 6
70 % 142 368 8
50 % 148 389 12
40 % 158 411 15
30 % 340 902 9
Entity #3 | Chains: C
Ubiquitin-conjugating enzyme E2 4 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58781
95 % 1 1 40677
90 % 1 1 38712
70 % 28 52 502
50 % 43 82 290
40 % 81 165 164
30 % 82 173 176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.