Sequence Similarity Clusters for the Entities in PDB 4II2

Entity #1 | Chains: A
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 13793
95 % 1 4 10503
90 % 1 4 10363
70 % 1 4 9826
50 % 3 9 3598
40 % 3 9 3473
30 % 3 9 3252
Entity #2 | Chains: B
Ubiquitin-60S ribosomal protein L40 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68702
95 % 1 2 34565
90 % 158 390 6
70 % 165 410 8
50 % 171 431 12
40 % 181 454 15
30 % 375 970 9
Entity #3 | Chains: C
Ubiquitin-conjugating enzyme E2 4 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61634
95 % 1 1 42667
90 % 1 1 40554
70 % 31 56 519
50 % 46 86 302
40 % 85 172 168
30 % 86 180 178

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.