Sequence Similarity Clusters for the Entities in PDB 4II2

Entity #1 | Chains: A
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 14130
95 % 1 4 10774
90 % 1 4 10640
70 % 1 4 10122
50 % 3 9 3687
40 % 3 9 3547
30 % 3 9 3319
Entity #2 | Chains: B
Ubiquitin-60S ribosomal protein L40 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70208
95 % 1 3 24298
90 % 165 407 6
70 % 172 427 8
50 % 178 448 12
40 % 188 472 16
30 % 401 1019 9
Entity #3 | Chains: C
Ubiquitin-conjugating enzyme E2 4 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62982
95 % 1 1 43639
90 % 1 1 41439
70 % 31 57 525
50 % 47 88 301
40 % 86 175 170
30 % 87 183 177

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.