Sequence Similarity Clusters for the Entities in PDB 4II2

Entity #1 | Chains: A
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22949
95 % 1 2 19600
90 % 1 2 19073
70 % 1 2 17602
50 % 2 4 7910
40 % 2 4 7266
30 % 2 4 6428
Entity #2 | Chains: B
Ubiquitin-60S ribosomal protein L40 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66257
95 % 1 2 33136
90 % 134 348 6
70 % 143 370 8
50 % 149 391 12
40 % 159 413 16
30 % 344 908 9
Entity #3 | Chains: C
Ubiquitin-conjugating enzyme E2 4 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59307
95 % 1 1 41021
90 % 1 1 39034
70 % 28 52 519
50 % 43 82 295
40 % 81 165 167
30 % 82 173 177

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.