Sequence Similarity Clusters for the Entities in PDB 4II2

Entity #1 | Chains: A
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 13918
95 % 1 4 10603
90 % 1 4 10461
70 % 1 4 9919
50 % 3 9 3635
40 % 3 9 3499
30 % 3 9 3280
Entity #2 | Chains: B
Ubiquitin-60S ribosomal protein L40 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69215
95 % 1 2 34871
90 % 159 395 6
70 % 166 415 8
50 % 172 436 12
40 % 182 460 16
30 % 384 987 10
Entity #3 | Chains: C
Ubiquitin-conjugating enzyme E2 4 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62136
95 % 1 1 43039
90 % 1 1 40891
70 % 31 56 543
50 % 46 86 306
40 % 85 172 170
30 % 86 180 179

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.