Sequence Similarity Clusters for the Entities in PDB 4II2

Entity #1 | Chains: A
Ubiquitin-activating enzyme E1 1 protein, length: 1001 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 21976
95 % 1 2 18812
90 % 1 2 18303
70 % 1 2 16912
50 % 2 4 7603
40 % 2 4 7000
30 % 2 4 6219
Entity #2 | Chains: B
Ubiquitin-60S ribosomal protein L40 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63798
95 % 1 2 31826
90 % 111 311 6
70 % 120 333 8
50 % 126 353 13
40 % 136 375 16
30 % 309 854 9
Entity #3 | Chains: C
Ubiquitin-conjugating enzyme E2 4 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57012
95 % 1 1 39499
90 % 1 1 37614
70 % 27 51 496
50 % 42 80 281
40 % 80 161 167
30 % 81 169 176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.