Sequence Similarity Clusters for the Entities in PDB 4IHT

Entity #1 | Chains: A,B,C,D
HTH-type transcriptional regulator BenM protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 7843
95 % 2 3 8427 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 2 3 8354
70 % 2 3 8037
50 % 2 3 7394
40 % 3 4 5703
30 % 3 4 5024
Entity #2 | Chains: E,G
benA site 1 DNA dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F,H
benA site 1 DNA - complement dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures