Sequence Similarity Clusters for the Entities in PDB 4IHS

Entity #1 | Chains: A,B,C,D
HTH-type transcriptional regulator BenM protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 7629
95 % 3 3 7713 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 3 7637
70 % 3 3 7410
50 % 3 3 7213
40 % 4 4 5573
30 % 4 4 4921
Entity #2 | Chains: E,G
catB site 1 DNA dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F,H
catB site 1 DNA - complement dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures