Sequence Similarity Clusters for the Entities in PDB 4IHS

Entity #1 | Chains: A,B,C,D
HTH-type transcriptional regulator BenM protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 7475
95 % 3 3 8045 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 3 7996
70 % 3 3 7737
50 % 3 3 7119
40 % 3 3 6617
30 % 3 3 5902
Entity #2 | Chains: E,G
catB site 1 DNA dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F,H
catB site 1 DNA - complement dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.