Sequence Similarity Clusters for the Entities in PDB 4IHJ

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 450 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 59 182
95 % 4 118 116
90 % 4 118 121
70 % 4 120 140
50 % 4 120 166
40 % 7 238 53
30 % 7 246 66
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 29 557
95 % 4 113 121
90 % 4 116 122
70 % 4 118 139
50 % 4 118 165
40 % 8 238 53
30 % 8 246 66
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 43 779
95 % 3 55 807
90 % 3 55 841
70 % 3 55 880
50 % 3 55 921
40 % 3 55 943
30 % 3 55 932
Entity #4 | Chains: F
TUBULIN TYROSINE LIGASE, TTL protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 34 1002
95 % 3 34 1402
90 % 3 34 1427
70 % 3 37 1290
50 % 3 37 1352
40 % 3 37 1367
30 % 3 37 1346

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.