Sequence Similarity Clusters for the Entities in PDB 4IHJ

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 450 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 69 171
95 % 5 138 109
90 % 5 138 114
70 % 5 140 128
50 % 5 140 153
40 % 9 278 56
30 % 9 286 65
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 39 395
95 % 5 133 114
90 % 5 136 115
70 % 5 138 127
50 % 5 138 152
40 % 10 278 56
30 % 10 286 65
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 52 690
95 % 4 65 717
90 % 4 65 748
70 % 4 65 791
50 % 4 65 837
40 % 4 65 865
30 % 4 65 852
Entity #4 | Chains: F
TUBULIN TYROSINE LIGASE, TTL protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 44 811
95 % 4 44 1108
90 % 4 44 1133
70 % 4 47 1077
50 % 4 47 1112
40 % 4 47 1127
30 % 4 47 1106

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.