Sequence Similarity Clusters for the Entities in PDB 4IHJ

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 450 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 42 228
95 % 2 96 133
90 % 2 96 140
70 % 2 98 158
50 % 2 98 182
40 % 3 195 89
30 % 3 203 99
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 806
95 % 2 93 134
90 % 2 95 141
70 % 2 97 157
50 % 2 97 181
40 % 4 195 89
30 % 4 203 99
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 30 1161
95 % 2 42 1072
90 % 2 42 1092
70 % 2 42 1129
50 % 2 42 1175
40 % 2 42 1199
30 % 2 42 1171
Entity #4 | Chains: F
TUBULIN TYROSINE LIGASE, TTL protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1859
95 % 2 21 2424
90 % 2 21 2470
70 % 2 24 1993
50 % 2 24 2009
40 % 2 24 2026
30 % 2 24 1930

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.