Sequence Similarity Clusters for the Entities in PDB 4IGA

Entity #1 | Chains: A
Chemotaxis protein CheY protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 9444
95 % 2 7 8124 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 2 7 8045
70 % 2 7 7751
50 % 2 7 7121
40 % 25 95 410
30 % 66 262 122
Entity #2 | Chains: B
Flagellar motor switch protein FliM protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62585
95 % 1 1 50876
90 % 1 1 48258
70 % 1 1 42284
50 % 1 1 35865
40 % 1 1 31395
30 % 1 1 26251

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures