Sequence Similarity Clusters for the Entities in PDB 4IFY

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 37 1028
95 % 10 248 82 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 4.0
PDBFlex
90 % 10 248 87
70 % 10 248 105
50 % 10 249 142
40 % 10 249 158
30 % 10 249 176
Entity #2 | Chains: B
p51 RT protein, length: 429 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 105 196
95 % 10 242 107 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 10 242 112
70 % 10 242 130
50 % 10 243 152
40 % 10 243 170
30 % 10 243 184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.