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An Information Portal to 105339 Biological Macromolecular Structures

Detecting Allosteric Sites of HIV-1 Reverse Transcriptase by X-Ray Crystallographic Fragment Screening
Sequence Clustering and Redundancy Reduction Results
4IFV
Sequence Clusters for the Sequence Entities in PDB 4IFV
Entity #1: Chains: A - Exoribonuclease H, p66 RT protein, length: 557 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 7 25 1244
95% 8 202 62
90% 8 202 65
70% 8 202 81
50% 8 203 118
40% 8 203 140
30% 8 203 162
Entity #2: Chains: B - Gag-Pol polyprotein protein, length: 429 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 67 252
95% 8 196 69
90% 8 196 73
70% 8 196 90
50% 8 197 120
40% 8 197 146
30% 8 197 173
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.