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An Information Portal to 110071 Biological Macromolecular Structures

Detecting Allosteric Sites of HIV-1 Reverse Transcriptase by X-Ray Crystallographic Fragment Screening
Sequence Clustering and Redundancy Reduction Results
4IFV
Sequence Clusters for the Sequence Entities in PDB 4IFV
Entity #1: Chains: A - Exoribonuclease H, p66 RT protein, length: 557 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 7 26 1242
95% 8 208 80
90% 8 208 83
70% 8 208 101
50% 8 209 139
40% 8 209 154
30% 8 209 171
Entity #2: Chains: B - Gag-Pol polyprotein protein, length: 429 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 73 238
95% 8 202 87
90% 8 202 92
70% 8 202 112
50% 8 203 146
40% 8 203 163
30% 8 203 182
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.