POP-OUT | CLOSE

An Information Portal to 106858 Biological Macromolecular Structures

Detecting Allosteric Sites of HIV-1 Reverse Transcriptase by X-Ray Crystallographic Fragment Screening
Sequence Clustering and Redundancy Reduction Results
4IFV
Sequence Clusters for the Sequence Entities in PDB 4IFV
Entity #1: Chains: A - Exoribonuclease H, p66 RT protein, length: 557 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 7 25 1271
95% 8 202 77
90% 8 202 80
70% 8 202 96
50% 8 203 132
40% 8 203 150
30% 8 203 170
Entity #2: Chains: B - Gag-Pol polyprotein protein, length: 429 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 67 254
95% 8 196 83
90% 8 196 87
70% 8 196 103
50% 8 197 136
40% 8 197 158
30% 8 197 180
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.