Sequence Similarity Clusters for the Entities in PDB 4IFV

Entity #1 | Chains: A
Exoribonuclease H, p66 RT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 30 1105
95 % 8 218 106
90 % 8 218 111
70 % 8 218 126
50 % 8 219 152
40 % 8 219 166
30 % 8 219 183
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 429 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 80 232
95 % 8 212 113
90 % 8 212 117
70 % 8 212 135
50 % 8 213 164
40 % 8 213 174
30 % 8 213 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.