Sequence Similarity Clusters for the Entities in PDB 4IFV

Entity #1 | Chains: A
Exoribonuclease H, p66 RT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 29 1162
95 % 8 215 100
90 % 8 215 105
70 % 8 215 121
50 % 8 216 150
40 % 8 216 164
30 % 8 216 182
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 429 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 78 232
95 % 8 209 109
90 % 8 209 114
70 % 8 209 132
50 % 8 210 158
40 % 8 210 171
30 % 8 210 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.