Sequence Similarity Clusters for the Entities in PDB 4IFV

Entity #1 | Chains: A
Exoribonuclease H, p66 RT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 30 1122
95 % 8 223 104
90 % 8 223 109
70 % 8 223 123
50 % 8 224 149
40 % 8 224 165
30 % 8 224 181
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 429 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 85 214
95 % 8 217 109
90 % 8 217 114
70 % 8 217 130
50 % 8 218 156
40 % 8 218 172
30 % 8 218 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.