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An Information Portal to 107620 Biological Macromolecular Structures

Detecting Allosteric Sites of HIV-1 Reverse Transcriptase by X-Ray Crystallographic Fragment Screening
Sequence Clustering and Redundancy Reduction Results
4IFV
Sequence Clusters for the Sequence Entities in PDB 4IFV
Entity #1: Chains: A - Exoribonuclease H, p66 RT protein, length: 557 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 7 25 1283
95% 8 203 77
90% 8 203 81
70% 8 203 96
50% 8 204 132
40% 8 204 150
30% 8 204 169
Entity #2: Chains: B - Gag-Pol polyprotein protein, length: 429 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 68 253
95% 8 197 84
90% 8 197 89
70% 8 197 104
50% 8 198 136
40% 8 198 159
30% 8 198 179
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.