Sequence Similarity Clusters for the Entities in PDB 4IFV

Entity #1 | Chains: A
Exoribonuclease H, p66 RT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 33 1106
95 % 8 231 107
90 % 8 231 112
70 % 8 231 129
50 % 8 232 157
40 % 8 232 171
30 % 8 232 189
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 429 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 88 224
95 % 8 225 116
90 % 8 225 119
70 % 8 225 136
50 % 8 226 165
40 % 8 226 180
30 % 8 226 198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.