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An Information Portal to 109093 Biological Macromolecular Structures

Detecting Allosteric Sites of HIV-1 Reverse Transcriptase by X-Ray Crystallographic Fragment Screening
Sequence Clustering and Redundancy Reduction Results
4IFV
Sequence Clusters for the Sequence Entities in PDB 4IFV
Entity #1: Chains: A - Exoribonuclease H, p66 RT protein, length: 557 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 7 26 1230
95% 8 208 78
90% 8 208 81
70% 8 208 96
50% 8 209 132
40% 8 209 151
30% 8 209 167
Entity #2: Chains: B - Gag-Pol polyprotein protein, length: 429 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 73 238
95% 8 202 83
90% 8 202 87
70% 8 202 103
50% 8 203 137
40% 8 203 157
30% 8 203 177
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.