Sequence Similarity Clusters for the Entities in PDB 4IFV

Entity #1 | Chains: A
Exoribonuclease H, p66 RT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 30 1158
95 % 8 228 104
90 % 8 228 108
70 % 8 228 123
50 % 8 229 150
40 % 8 229 167
30 % 8 229 183
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 429 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 85 218
95 % 8 222 112
90 % 8 222 117
70 % 8 222 133
50 % 8 223 159
40 % 8 223 174
30 % 8 223 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.