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Human apurinic/apyrimidinic endonuclease (APE1) with product DNA and Mg2+
Sequence Clustering and Redundancy Reduction Results
4IEM
Sequence Clusters for the Sequence Entities in PDB 4IEM
Entity #1: Chains: A,B,C,D - DNA-(apurinic or apyrimidinic site) lyase protein, length: 317 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 6 2170
95% 10 14 1373
90% 10 14 1401
70% 11 15 1289
50% 11 15 1347
40% 23 38 569
30% 27 42 530
Entity #2: Chains: E,H,K,N - DNA (5'-D(*GP*CP*TP*AP*C)-3') dna, length: 5 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: F,I,L,O - DNA (5'-D(P*(3DR)P*GP*AP*TP*CP*G)-3') dna, length: 6 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: G,J,M,P - DNA (5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP*C)-3') dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.