Sequence Similarity Clusters for the Entities in PDB 4IDX

Entity #1 | Chains: A,B,C
Nucleocapsid protein protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 3561
95 % 5 5 4337 Flexibility: Low
Max RMSD: 5.6, Avg RMSD: 2.9
PDBFlex
90 % 5 5 4362
70 % 5 5 4291
50 % 7 7 2619
40 % 11 11 1417
30 % 11 11 1393

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.