Sequence Similarity Clusters for the Entities in PDB 4IDX

Entity #1 | Chains: A,B,C
Nucleocapsid protein protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 4377
95 % 5 5 4699 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 3.0
PDBFlex
90 % 5 5 4730
70 % 5 5 4606
50 % 7 7 2809
40 % 11 11 1484
30 % 11 11 1476

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures