Sequence Similarity Clusters for the Entities in PDB 4ICG

Entity #1 | Chains: A,B
DNA-binding protein H-NS protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14834
95 % 1 3 14010 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 3 13784
70 % 1 3 12938
50 % 1 3 11536
40 % 1 3 10452
30 % 1 3 9116
Entity #2 | Chains: C,D
Hemolysin expression modulating protein (Involved in environmental regulation of virulence factors) protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49771
95 % 1 3 21483 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 3 20861
70 % 1 4 14354
50 % 1 4 12720
40 % 1 5 10364
30 % 1 5 9031

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures