Sequence Similarity Clusters for the Entities in PDB 4ICG

Entity #1 | Chains: A,B
DNA-binding protein H-NS protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14607
95 % 1 3 13807 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 3 13587
70 % 1 3 12771
50 % 1 3 11389
40 % 1 3 10329
30 % 1 3 9007
Entity #2 | Chains: C,D
Hemolysin expression modulating protein (Involved in environmental regulation of virulence factors) protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49202
95 % 1 3 21208 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 3 20603
70 % 1 4 14179
50 % 1 4 12572
40 % 1 5 10239
30 % 1 5 8921

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures