Sequence Similarity Clusters for the Entities in PDB 4ICG

Entity #1 | Chains: A,B
DNA-binding protein H-NS protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14493
95 % 1 3 13710 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 3 13497
70 % 1 3 12690
50 % 1 3 11321
40 % 1 3 10267
30 % 1 3 8959
Entity #2 | Chains: C,D
Hemolysin expression modulating protein (Involved in environmental regulation of virulence factors) protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48858
95 % 1 3 21062 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 3 20467
70 % 1 4 14085
50 % 1 4 12497
40 % 1 5 10179
30 % 1 5 8874

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures