Sequence Similarity Clusters for the Entities in PDB 4ICG

Entity #1 | Chains: A,B
DNA-binding protein H-NS protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 13932
95 % 1 3 13202
90 % 1 3 12996
70 % 1 3 12196
50 % 1 3 10891
40 % 1 3 9887
30 % 1 3 8617
Entity #2 | Chains: C,D
Hemolysin expression modulating protein (Involved in environmental regulation of virulence factors) protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47179
95 % 1 3 20230 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 3 19671
70 % 1 4 13532
50 % 1 4 12030
40 % 1 5 9801
30 % 1 5 8531

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.