Sequence Similarity Clusters for the Entities in PDB 4IC7

Entity #1 | Chains: A,D
Mitogen-activated protein kinase 7 protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 17018
95 % 1 3 15792 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.9
PDBFlex
90 % 1 3 15458
70 % 1 3 14458
50 % 1 3 12348
40 % 421 501 59
30 % 3373 4337 2
Entity #2 | Chains: B,E
Dual specificity mitogen-activated protein kinase kinase 5 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44333
95 % 1 1 37039 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 35355
70 % 1 1 31412
50 % 1 1 26717
40 % 1 1 23437
30 % 1 1 19528

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures