Sequence Similarity Clusters for the Entities in PDB 4IC7

Entity #1 | Chains: A,D
Mitogen-activated protein kinase 7 protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14631
95 % 1 3 13855 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.9
PDBFlex
90 % 1 3 13636
70 % 1 3 12827
50 % 1 3 11429
40 % 400 477 62
30 % 3042 3912 2
Entity #2 | Chains: B,E
Dual specificity mitogen-activated protein kinase kinase 5 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45838
95 % 1 1 34375 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 32839
70 % 1 1 29241
50 % 1 1 24963
40 % 1 1 21963
30 % 1 1 18591

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures