Sequence Similarity Clusters for the Entities in PDB 4IC7

Entity #1 | Chains: A,D
Mitogen-activated protein kinase 7 protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14432
95 % 1 3 13677 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.9
PDBFlex
90 % 1 3 13465
70 % 1 3 12680
50 % 1 3 11299
40 % 400 475 61
30 % 2970 3825 2
Entity #2 | Chains: B,E
Dual specificity mitogen-activated protein kinase kinase 5 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45263
95 % 1 1 33945 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 32455
70 % 1 1 28939
50 % 1 1 24705
40 % 1 1 21742
30 % 1 1 18409

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.