Sequence Similarity Clusters for the Entities in PDB 4IC7

Entity #1 | Chains: A,D
Mitogen-activated protein kinase 7 protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15141
95 % 1 3 14288 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.9
PDBFlex
90 % 1 3 14059
70 % 1 3 13204
50 % 1 3 11765
40 % 403 482 77
30 % 3185 4073 2
Entity #2 | Chains: B,E
Dual specificity mitogen-activated protein kinase kinase 5 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47128
95 % 1 1 35270 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 33670
70 % 1 1 29955
50 % 1 1 25540
40 % 1 1 22476
30 % 1 1 19021

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures