Sequence Similarity Clusters for the Entities in PDB 4IBU

Entity #1 | Chains: A,B,C,D
Cellular tumor antigen p53 protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 8854
95 % 26 82 154 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 27 83 163
70 % 29 91 176
50 % 29 106 155
40 % 29 106 173
30 % 29 106 187
Entity #2 | Chains: E,F,G,H
DNA (5'-D(*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*G)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.