Sequence Similarity Clusters for the Entities in PDB 4IBU

Entity #1 | Chains: A,B,C,D
Cellular tumor antigen p53 protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9400
95 % 26 82 166 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 27 83 173
70 % 29 91 182
50 % 29 106 167
40 % 29 106 182
30 % 29 106 195
Entity #2 | Chains: E,F,G,H
DNA (5'-D(*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*G)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures