Sequence Similarity Clusters for the Entities in PDB 4IA1

Entity #1 | Chains: A
Vitamin D3 receptor A protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 24 1858
95 % 11 27 2126 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 11 27 2181
70 % 11 27 2180
50 % 11 27 2163
40 % 11 27 2149
30 % 20 47 994
Entity #2 | Chains: B
Nuclear receptor coactivator 2 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.