Sequence Similarity Clusters for the Entities in PDB 4IA1

Entity #1 | Chains: A
Vitamin D3 receptor A protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 25 1781
95 % 12 28 2072 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 12 28 2120
70 % 12 28 2124
50 % 12 28 2117
40 % 12 28 2113
30 % 21 49 978
Entity #2 | Chains: B
Nuclear receptor coactivator 2 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures