Sequence Similarity Clusters for the Entities in PDB 4I9Y

Entity #1 | Chains: A,B,C,D,E,F
E3 SUMO-protein ligase RanBP2 protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9730
95 % 1 2 9851 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 9737
70 % 1 2 9286
50 % 76 225 120
40 % 79 243 137
30 % 80 253 136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures