Sequence Similarity Clusters for the Entities in PDB 4I9Y

Entity #1 | Chains: A,B,C,D,E,F
E3 SUMO-protein ligase RanBP2 protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9319
95 % 1 2 9498 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 9388
70 % 1 2 8972
50 % 74 223 111
40 % 77 241 127
30 % 78 251 131

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.