Sequence Similarity Clusters for the Entities in PDB 4I9Y

Entity #1 | Chains: A,B,C,D,E,F
E3 SUMO-protein ligase RanBP2 protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9466
95 % 1 2 9621 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 9509
70 % 1 2 9082
50 % 74 223 115
40 % 77 241 135
30 % 78 251 133

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures