Sequence Similarity Clusters for the Entities in PDB 4I99

Entity #1 | Chains: A,B
Chromosome partition protein Smc protein, length: 354 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34523
95 % 1 1 27458 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 26525
70 % 1 1 24019
50 % 1 1 20658
40 % 2 3 5692
30 % 2 3 5109
Entity #2 | Chains: C,D
Putative uncharacterized protein protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47439
95 % 1 1 35430 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 33856
70 % 1 1 30129
50 % 1 1 25756
40 % 1 1 22716
30 % 1 1 19241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.