Sequence Similarity Clusters for the Entities in PDB 4I99

Entity #1 | Chains: A,B
Chromosome partition protein Smc protein, length: 354 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36047
95 % 1 1 28594 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 27599
70 % 1 1 24940
50 % 1 1 21415
40 % 2 3 5940
30 % 2 3 5335
Entity #2 | Chains: C,D
Putative uncharacterized protein protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49417
95 % 1 1 36846 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 35161
70 % 1 1 31227
50 % 1 1 26652
40 % 1 1 23503
30 % 1 1 19893

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures