Sequence Similarity Clusters for the Entities in PDB 4I99

Entity #1 | Chains: A,B
Chromosome partition protein Smc protein, length: 354 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35287
95 % 1 1 28029 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 27067
70 % 1 1 24478
50 % 1 1 21048
40 % 2 3 5816
30 % 2 3 5218
Entity #2 | Chains: C,D
Putative uncharacterized protein protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48444
95 % 1 1 36162 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 34530
70 % 1 1 30683
50 % 1 1 26224
40 % 1 1 23120
30 % 1 1 19583

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures