Sequence Similarity Clusters for the Entities in PDB 4I7Y

Entity #1 | Chains: H
Prothrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 234 290 59
95 % 302 377 40 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 305 384 40
70 % 316 408 46
50 % 316 408 84
40 % 1407 1721 4
30 % 1515 1871 6
Entity #2 | Chains: L
Prothrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 270 338 45
95 % 271 339 64 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 271 339 67
70 % 272 341 78
50 % 272 341 107
40 % 272 341 131
30 % 272 341 138
Entity #3 | Chains: D
DNA (27-MER) dna, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures