Sequence Similarity Clusters for the Entities in PDB 4I79

Entity #1 | Chains: A,B
Nucleoporin Nup43 protein, length: 399 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12442
95 % 1 2 11934 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 11769
70 % 1 2 11120
50 % 1 2 11372
40 % 1 2 10212
30 % 1 2 8714
Entity #2 | Chains: C
floating chain, unknown sequence protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures