Sequence Similarity Clusters for the Entities in PDB 4I6M

Entity #1 | Chains: A
Actin-related protein 7 protein, length: 477 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 24255
95 % 1 3 21615 Flexibility: Medium
Max RMSD: 5.4, Avg RMSD: 3.1
PDBFlex
90 % 1 3 20946
70 % 1 3 19164
50 % 1 3 16580
40 % 1 3 14671
30 % 1 3 12325
Entity #2 | Chains: B
Actin-like protein ARP9 protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64696
95 % 1 1 52503
90 % 1 3 20947
70 % 1 3 19165
50 % 1 3 16581
40 % 1 3 14672
30 % 1 3 12326
Entity #3 | Chains: C
Actin-like protein ARP9 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66402
95 % 1 1 53764
90 % 1 1 50911
70 % 1 1 44487
50 % 1 1 37711
40 % 1 1 32970
30 % 1 1 27584
Entity #4 | Chains: D
Regulator of Ty1 transposition protein 102 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30420
95 % 1 2 26535 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 1 2 25285
70 % 1 2 22847
50 % 1 2 19619
40 % 1 2 17311
30 % 1 2 14529

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures