Sequence Similarity Clusters for the Entities in PDB 4I6M

Entity #1 | Chains: A
Actin-related protein 7 protein, length: 477 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 23682
95 % 1 3 21078 Flexibility: Medium
Max RMSD: 5.4, Avg RMSD: 3.1
PDBFlex
90 % 1 3 20450
70 % 1 3 18755
50 % 1 3 16249
40 % 1 3 14389
30 % 1 3 12064
Entity #2 | Chains: B
Actin-like protein ARP9 protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63606
95 % 1 1 51675
90 % 1 3 20451
70 % 1 3 18756
50 % 1 3 16250
40 % 1 3 14390
30 % 1 3 12065
Entity #3 | Chains: C
Actin-like protein ARP9 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65268
95 % 1 1 52922
90 % 1 1 50162
70 % 1 1 43846
50 % 1 1 37182
40 % 1 1 32529
30 % 1 1 27200
Entity #4 | Chains: D
Regulator of Ty1 transposition protein 102 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29723
95 % 1 2 25933 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 1 2 24742
70 % 1 2 22418
50 % 1 2 19260
40 % 1 2 17206
30 % 1 2 14256

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures