Sequence Similarity Clusters for the Entities in PDB 4I50

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 49 142 72
95 % 49 205 55 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 49 206 60
70 % 49 214 69
50 % 49 214 97
40 % 97 426 17
30 % 98 436 31
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 48 176 55
95 % 49 201 57 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 49 206 58
70 % 49 212 68
50 % 49 212 96
40 % 98 426 17
30 % 99 436 31
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 76 514
95 % 41 97 460 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.0
PDBFlex
90 % 41 97 493
70 % 41 97 529
50 % 41 98 563
40 % 41 98 603
30 % 41 98 603
Entity #4 | Chains: F
Tubulin Tyrosine Ligase, TTL protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 81 471
95 % 39 81 584 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 0.8
PDBFlex
90 % 39 81 615
70 % 39 84 616
50 % 39 84 660
40 % 39 84 699
30 % 39 84 704

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures