Sequence Similarity Clusters for the Entities in PDB 4I50

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 88 124
95 % 41 166 77 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 41 167 81
70 % 41 174 91
50 % 41 174 128
40 % 81 346 31
30 % 82 356 41
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 57 251
95 % 41 162 78 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 41 167 79
70 % 41 172 90
50 % 41 172 127
40 % 82 346 31
30 % 83 356 41
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 63 571
95 % 33 76 606 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.1
PDBFlex
90 % 33 76 635
70 % 33 76 680
50 % 33 76 730
40 % 33 76 765
30 % 33 76 756
Entity #4 | Chains: F
Tubulin Tyrosine Ligase, TTL protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 58 642
95 % 31 58 858 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 0.9
PDBFlex
90 % 31 58 891
70 % 31 61 865
50 % 31 61 923
40 % 31 61 949
30 % 31 61 926

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.