Sequence Similarity Clusters for the Entities in PDB 4I4W

Entity #1 | Chains: A
HLA class I histocompatibility antigen, A-2 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 45 217 57
95 % 54 262 61 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 58 316 38
70 % 137 771 6
50 % 140 785 7
40 % 141 837 9
30 % 150 964 12
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 141 701 2
95 % 146 716 2 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 146 725 4
70 % 164 979 4
50 % 168 1001 3
40 % 168 1001 6
30 % 168 1001 9
Entity #3 | Chains: C
Immunogenic peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures