Sequence Similarity Clusters for the Entities in PDB 4I4T

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 450 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 91 114
95 % 2 169 75 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 2 170 79
70 % 2 177 91
50 % 2 177 123
40 % 3 352 28
30 % 3 362 41
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 59 241
95 % 2 165 79 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 2 170 75
70 % 2 175 90
50 % 2 175 122
40 % 4 352 28
30 % 4 362 41
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 65 556
95 % 2 78 596
90 % 2 78 621
70 % 2 78 668
50 % 2 78 714
40 % 2 78 742
30 % 2 78 743
Entity #4 | Chains: F
Tubulin Tyrosine ligase, TTL protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 60 611
95 % 2 60 826 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 0.9
PDBFlex
90 % 2 60 860
70 % 2 63 834
50 % 2 63 891
40 % 2 63 913
30 % 2 63 899

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.