Sequence Similarity Clusters for the Entities in PDB 4I2Q

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 15476
95 % 85 230 106
90 % 85 230 110
70 % 85 230 125
50 % 86 231 153
40 % 86 231 169
30 % 86 231 185
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 87 217
95 % 82 224 114
90 % 82 224 120
70 % 82 224 137
50 % 83 225 164
40 % 83 225 178
30 % 83 225 194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.