Sequence Similarity Clusters for the Entities in PDB 4I2Q

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 10991
95 % 100 248 85
90 % 100 248 90
70 % 100 248 108
50 % 101 249 144
40 % 101 249 160
30 % 101 249 179
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 105 198
95 % 97 242 111
90 % 97 242 115
70 % 97 242 131
50 % 98 243 154
40 % 98 243 172
30 % 98 243 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.