Sequence Similarity Clusters for the Entities in PDB 4I2P

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 33 1116
95 % 27 236 104
90 % 27 236 108
70 % 27 236 123
50 % 28 237 149
40 % 28 237 166
30 % 28 237 183
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 93 212
95 % 27 230 111
90 % 27 230 116
70 % 27 230 136
50 % 28 231 160
40 % 28 231 177
30 % 28 231 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.