Sequence Similarity Clusters for the Entities in PDB 4I2P

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 32 1128
95 % 27 230 106
90 % 27 230 110
70 % 27 230 127
50 % 28 231 154
40 % 28 231 172
30 % 28 231 187
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 87 219
95 % 27 224 116
90 % 27 224 120
70 % 27 224 137
50 % 28 225 164
40 % 28 225 179
30 % 28 225 196

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.