Sequence Similarity Clusters for the Entities in PDB 4I2P

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 30 1122
95 % 27 223 104
90 % 27 223 109
70 % 27 223 123
50 % 28 224 149
40 % 28 224 165
30 % 28 224 181
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 85 214
95 % 27 217 109
90 % 27 217 114
70 % 27 217 130
50 % 28 218 156
40 % 28 218 172
30 % 28 218 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.