Sequence Similarity Clusters for the Entities in PDB 4I2P

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 30 1154
95 % 27 228 104
90 % 27 228 108
70 % 27 228 122
50 % 28 229 149
40 % 28 229 166
30 % 28 229 183
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 85 218
95 % 27 222 111
90 % 27 222 116
70 % 27 222 133
50 % 28 223 159
40 % 28 223 174
30 % 28 223 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.