Sequence Similarity Clusters for the Entities in PDB 4I2P

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 30 1115
95 % 27 218 107
90 % 27 218 112
70 % 27 218 126
50 % 28 219 152
40 % 28 219 167
30 % 28 219 185
Entity #2 | Chains: B
Gag-Pol polyprotein protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 80 232
95 % 27 212 113
90 % 27 212 117
70 % 27 212 135
50 % 28 213 164
40 % 28 213 175
30 % 28 213 191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.