Sequence Similarity Clusters for the Entities in PDB 4I1S

Entity #1 | Chains: A
Melanoma differentiation associated protein-5 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59894
95 % 1 1 42274
90 % 1 1 40337
70 % 1 1 35707
50 % 1 1 30423
40 % 1 1 26826
30 % 1 1 22740
Entity #2 | Chains: B
Non-structural protein V protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74636
95 % 1 1 51792
90 % 1 1 49102
70 % 1 1 43042
50 % 1 1 36690
40 % 1 1 32285
30 % 1 1 27276

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures