Sequence Similarity Clusters for the Entities in PDB 4I1S

Entity #1 | Chains: A
Melanoma differentiation associated protein-5 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55716
95 % 1 1 50780
90 % 1 1 48170
70 % 1 1 42217
50 % 1 1 35807
40 % 1 1 31348
30 % 1 1 26209
Entity #2 | Chains: B
Non-structural protein V protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55715
95 % 1 1 45740
90 % 1 1 43498
70 % 1 1 38291
50 % 1 1 32489
40 % 1 1 28465
30 % 1 1 23767

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures