Sequence Similarity Clusters for the Entities in PDB 4I1O

Entity #1 | Chains: A,C,E,G
Ras-related protein Rab-1B protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 5114
95 % 7 16 1721
90 % 8 18 1620
70 % 10 20 1521
50 % 60 84 287
40 % 359 441 23
30 % 592 772 16
Entity #2 | Chains: B,D,F,H
LepB protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 10112
95 % 2 3 6774
90 % 2 3 6757
70 % 2 3 6602
50 % 2 3 6128
40 % 2 3 5732
30 % 2 4 4773

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.