Sequence Similarity Clusters for the Entities in PDB 4I1O

Entity #1 | Chains: A,C,E,G
Ras-related protein Rab-1B protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 4480
95 % 7 16 1498
90 % 7 16 1527
70 % 9 18 1439
50 % 54 72 273
40 % 326 389 29
30 % 542 701 14
Entity #2 | Chains: B,D,F,H
LepB protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 8958
95 % 2 3 5984
90 % 2 3 5986
70 % 2 3 5872
50 % 2 3 5488
40 % 2 3 5148
30 % 2 4 4321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.