Sequence Similarity Clusters for the Entities in PDB 4HYK

Entity #1 | Chains: A
DNA polymerase IV protein, length: 354 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 18658
95 % 7 8 6804 Flexibility: Medium
Max RMSD: 6.0, Avg RMSD: 3.2
PDBFlex
90 % 7 8 6784
70 % 120 135 234
50 % 120 135 256
40 % 120 135 271
30 % 120 135 278
Entity #2 | Chains: P
DNA (5'-D(*GP*GP*GP*AP*AP*GP*CP*CP*GP*G)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: T
DNA (5'-D(*TP*TP*CP*CP*GP*CP*CP*CP*CP*GP*GP*CP*TP*TP*CP*CP*C)-3') dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures